1. fgsea::exampleExpressionMatrix
    Example of expression values obtained for GSE14308.
    csv| json| rda| rds
    matrix|10000 x 12
  2. fgsea::examplePathways
    Example list of mouse Reactome pathways.
    json| rda| rds
    list
  3. fgsea::exampleRanks
    Example vector of gene-level statistics obtained for Th1 polarization.
    json| rda| rds
    numeric
  4. gatom::gEx
    Example metabolic graph with atom topology.
    rda| rds
    igraph
  5. gatom::gene.de.rawEx
    Example gene differential expression data.
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|617 x 4
  6. gatom::gsEx
    Example scored metabolic graph with atom topology.
    rda| rds
    igraph
  7. gatom::mEx
    Example metabolic module.
    rda| rds
    igraph
  8. gatom::met.de.rawEx
    Example metabolite differential abundance data.
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|54 x 4
  9. gatom::met.kegg.dbEx
    Example KEGG-based metabolite database object
    json| rda| rds
    list
  10. gatom::networkEx
    Example KEGG-based network object
    json| rda| rds
    list
  11. gatom::org.Mm.eg.gatom.annoEx
    Example organism annotation object
    json| rda| rds
    list
  12. mwcsr::bionet_example
    Example MWCS instance obtained from BioNet package tutorial
    rda| rds
    igraph
  13. mwcsr::gam_example
    GAM instance for MWCS problem
    rda| rds
    igraph
  14. mwcsr::gatom_example
    Example of graph from which an SGMWCS instance can be obtained
    rda| rds
    igraph
  15. mwcsr::gmwcs_example
    Example GMWCS instance
    rda| rds
    igraph
  16. mwcsr::gmwcs_small_instance
    Small example of GMWCS instance for demonstration purposes.
    rda| rds
    igraph
  17. mwcsr::mwcs_example
    Example MWCS instance
    rda| rds
    igraph
  18. mwcsr::mwcs_small_instance
    Small example of MWCS instance for demonstration purposes.
    rda| rds
    igraph
  19. mwcsr::sgmwcs_example
    Example SGMWCS instance
    rda| rds
    igraph
  20. mwcsr::sgmwcs_small_instance
    Small example of SGMWCS instance for demonstration purposes.
    rda| rds
    igraph
  21. phantasus::es
    Example dataset
    rda| rds
    ExpressionSet
  22. phantasus::fgseaExample
    Example pathway data.frame for fgsea tool
    csv| xlsx| json| ndjson| rda| rds
    data.frame|43 x 3